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Journal Article

Lindquist MA, Wager TD. 2007. Validity and Power in Hemodynamic Response Modeling: A comparison study and a new approach. Human Brain Mapping. 28:764-784.

Laffan A, Caffo B, Swihart B, Punjabi N. 2010. Utility of sleep stage transitions in assessing sleep continuity. Sleep, PMCID: PMC2982738. 33:1681.

Caffo B, Griswold M. 2006. A user-friendly tutorial on link-probit-normal models. The American Statistician. 60:139–145.

Navas-Acien A, Umans JG, Howard BV, Goessler W, Francesconi KA, Crainiceanu C, Silbergeld EK, Guallar E. 2009. Urine arsenic concentrations and species excretion patterns in American Indian communities over a 10-year period: the Strong Heart Study. Environ. Health Perspect.. 117:1428–1433.

Swihart BJ, Caffo BS, Crainiceanu CM. 2014. A unifying framework for marginalized random intercept models of correlated binary outcomes.. Int Stat Rev. 82(2):275-295.

Booth J, Caffo B. 2002. Unequal sampling for Monte Carlo EM algorithms. Computational Statistics and Data Analysis. 39:261–270.

Caffo B, Crainiceanu C, Verduzco G, Joel S, Mostofsky S, Bassett S, Pekar J. 2010. Two-stage decompositions for the analysis of functional connectivity for fMRI with application to Alzheimer’s disease risk. Neuroimage. 51:1140–1149.

Lauzon CB, Caffo BC, Landman BA. 2012. Towards Automatic Quantitative Quality Control for MRI.. Proc Soc Photo Opt Instrum Eng. 8314

He X, Caffo B, Frey E. 2008. Toward Realistic and Practical Ideal Observer (IO) Estimation for the Optimization of Medical Imaging Systems. IEEE Transactions on Medical Imaging, PMCID: PMC2739397. 27:1535–1543.

Tighe SK, Reading SA, Rivkin P, Caffo B, Schweizer B, Pearlson G, Potash JB, J Depaulo R, Bassett SS. 2012. Total white matter hyperintensity volume in bipolar disorder patients and their healthy relatives.. Bipolar Disord. 14(8):888-93.

Choi L, Caffo B, Rohde C. 2008. A survey of the likelihood approach to bioequivalence trials. Statistics in Medicine, PMCID: PMC2778077. 27:4874–4894.

Thom KA, Li S, Custer M, Preas MAnne, Rew CD, Cafeo C, Leekha S, Caffo BS, Scalea TM, Lissauer ME. 2014. Successful implementation of a unit-based quality nurse to reduce central line-associated bloodstream infections.. Am J Infect Control. 42(2):139-43.

Shou H, Zipunnikov V, Crainiceanu CM, Greven S. 2014. Structured functional principal component analysis.. Biometrics.

Shinohara RT, Sweeney EM, Goldsmith J, Shiee N, Mateen FJ, Calabresi PA, Jarso S, Pham DL, Reich DS, Crainiceanu CM. 2014. Statistical normalization techniques for magnetic resonance imaging.. Neuroimage Clin. 6:9-19.

Lindquist MA. 2008. The Statistical Analysis of fMRI Data. Statistical Science. 23:439–464.

Yacoub E, Duong TQ, De Moortele V, Lindquist MA, Adriany G, Kim S-G, Uğurbil K, Hu X, others. 2003. Spin-echo fMRI in humans using high spatial resolutions and high magnetic fields. Magnetic resonance in medicine. 49:655–664.

Vogelstein JT, Watson BO, Packer AM, Yuste R, Jedynak B, Paninski L. 2009. Spike inference from calcium imaging using sequential Monte Carlo methods.. Biophys J. 97:636–655.

Crainiceanu C, Ruppert D, Carroll RJ, Joshi A, Goodner B. 2007. Spatially Adaptive Bayesian Penalized Splines with Heteroscedastic Errors. Journal of Computational and Graphical Statistics. 16:265–288.

Reiss PT, Huang L. Submitted. Smoothness Selection for Penalized Quantile Regression Splines. International Journal of Biostatistics} year={2012.

Goldsmith J, Huang L, Crainiceanu CM. 2014. Smooth Scalar-on-Image Regression via Spatial Bayesian Variable Selection.. J Comput Graph Stat. 23(1):46-64.

Punjabi N, Caffo B, Goodwin J, Gottlieb D, Newman A, O'Connor G, Rapoport D, Redline S, Resnick H, Robbins J et al.. 2009. Sleep-disordered Breathing and Mortality: a Prospective Cohort Study. PLOS Medicine, PMCID: PMC2722083. 6

Aurora RN, Crainiceanu C, Caffo B, Punjabi N. 2012. Sleep-Disordered breathing and caffeine consumption: results of a community-based study. Accepted in Chest.

Agresti A, Caffo B. 2000. Simple and effective confidence intervals for proportions and differences of proportions result from adding two successes and two failures. The American Statistician. 54:280–288.

Vogelstein JT, Priebe CE. 2011. Shuffled Graph Classification: Theory and Connectome Applications. under review.

Shou H, Eloyan A, Nebel MBeth, Mejia A, Pekar JJ, Mostofsky S, Caffo B, Lindquist MA, Crainiceanu CM. 2014. Shrinkage prediction of seed-voxel brain connectivity using resting state fMRI.. Neuroimage. 102 Pt 2:938-44.

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