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Journal Article

Sotirchos ES, Saidha S, Byraiah G, Mealy MA, Ibrahim MA, Sepah YJamal, Newsome SD, Ratchford JN, Frohman EM, Balcer LJ et al.. 2013. In vivo identification of morphologic retinal abnormalities in neuromyelitis optica.. Neurology. 80(15):1406-14.

Lee S, Shen H, Truong Y, Lewis M, Huang X. 2011. Independent Component Analysis Involving Autocorrelated Sources With an Application to Functional Magnetic Resonance Imaging. Journal of the American Statistical Association. 106:1009–1024.

Yousem D, Yassa M, Cristinzio C, Kusevic I, Mohamed M, Caffo B, Bassett S. 2009. Intelligence and Medial Temporal Lobe Function in Older Adults: A Functional MR Imaging-Based Investigation. American Journal of Neuroradiology, PMCID: PMC2843089. 30:1477–1481.

Lindquist MA, Caffo B, Crainiceanu C. 2013. Ironing out the statistical wrinkles in "ten ironic rules".. Neuroimage. 81:499-502.

Leyva FJ, Bakshi RP, Fuchs EJ, Li L, Caffo BS, Goldsmith AJ, Ventuneac A, Carballo-Diéguez A, Du Y, Leal JP et al.. 2013. Isoosmolar enemas demonstrate preferential gastrointestinal distribution, safety, and acceptability compared with hyperosmolar and hypoosmolar enemas as a potential delivery vehicle for rectal microbicides.. AIDS Res Hum Retroviruses. 29(11):1487-95.

Swihart B, Caffo B, James B, Strand M, Schwartz B, Punjabi N. 2010. Lasagna plots: A Saucy alternative to spaghetti plots. Epidemiology. 21:621–625.

Caffo B, Dongmei L, Scharpf R, Parmigiani G. 2008. Likelihood Estimation of Conjugacy Relationships in Linear Models with Applications to High-Throughput Genomics. International Journal of Biostatistics, PMCID: PMC2827886. 5

Crainiceanu C, Ruppert D. 2004. Likelihood Ratio Tests in Linear Mixed Models with One Variance Component. Journal of the Royal Statistical Society, Series B: Statistical Methodology. 66:165–185.

Eloyan A, Crainiceanu CM, Caffo BS. 2013. Likelihood-based population independent component analysis.. Biostatistics. 14(3):514-27.

Lindquist MA, McKeague IW. 2009. Logistic Regression with Brownian-like Predictors. Journal of the American Statistical Association. 104:1575-1585.

Shinohara R, Crainiceanu C, Caffo B, Reich DS. 2011. Longitudinal Analysis of Spatiotemporal Processes: A Case Study of Dynamic Contrast-Enhanced Magnetic Resonance in Multiple Sclerosis. Johns Hopkins University, Dept. of Biostatistics Working Papers. :231.

Harrison D, Caffo B, Shiee N, Farrell, J Bazin P, Farrell S, Ratchford J, Calabresi P, Reich D. 2011. Longitudinal changes in diffusion-tensor-based quantitative MRI in multiple sclerosis. Neurology, PMCID: PMC3030233. 76:179–186.

Greven S, Crainiceanu C, Caffo B, Reich D. 2010. Longitudinal functional principal components analysis. Electronic Journal of Statistics, PMCID: PMC3131008. 4:1022-1054.

Goldsmith J, Crainiceanu C, Caffo B, Reich D. 2012. Longitudinal penalized functional regression for cognitive outcomes on neuronal tract measurements. Journal of the Royal Statistical Society Series C. :453–469.

Gertheiss J, Goldsmith J, Crainiceanu C, Greven S. 2013. Longitudinal scalar-on-functions regression with application to tractography data.. Biostatistics. 14(3):447-61.

Greenspan DL, Connolly DC, Wu R, Lei RY, Vogelstein JT, Kim YT, Mok JE, Muñoz N, Bosch FX, Shah K et al.. 1997. Loss of FHIT expression in cervical carcinoma cell lines and primary tumors.. Cancer Research. 57:4692–4698.

Caffo B, Booth J. 2001. A Markov chain Monte Carlo algorithm for approximating exact conditional probabilities. Journal of Computational and Graphical Statistics. 10:730–745.

Agresti A, Caffo B. 2002. Measures of relative model fit. Computational Statistics and Data Analysis. 39:127–136.

Choi L, Caffo B, Rohde C, Ndovi T, Hendrix C. 2008. A mechanistic latent variable model for estimating drug concentrations in the male genital tract: A case study in drug kinetics. Statistics in Medicine, PMCID: PMC2763330. 27:2697–2714.

Massie A, Caffo B, Gentry S, Hall E, Axelrod D, Lentine K, Schnitzler M, Gheorghian A, Salvalaggio P, Segev D. 2011. MELD Exceptions and Rates of Waiting List Outcomes. American Journal of Transplantation. 11:2362–2371.

Gardner RM, Nyland JF, Evans SL, Wang SB, Doyle KM, Crainiceanu C, Silbergeld EK. 2009. Mercury induces an unopposed inflammatory response in human peripheral blood mononuclear cells in vitro. Environ. Health Perspect.. 117:1932–1938.

Wager TD, Lindquist MA, Kaplan L. 2007. Meta-analysis of functional neuroimaging data: current and future directions. Social Cognitive and Affective Neuroscience. 2:150–158.

Saidha S, Sotirchos ES, Ibrahim MA, Crainiceanu CM, Gelfand JM, Sepah YJ, Ratchford JN, Oh J, Seigo MA, Newsome SD et al.. 2012. Microcystic macular oedema, thickness of the inner nuclear layer of the retina, and disease characteristics in multiple sclerosis: a retrospective study.. Lancet Neurol. 11(11):963-72.

Mondul AM, Caffo B, Platz EA. 2011. Minimal detection bias in the inverse association between statin drug use and advanced prostate cancer risk: A simulation study. Cancer Epidemiology, PMCID: PMC3142317. 35:e6-e11.

Swihart B, Caffo B, Crainiceanu C, Punjabi NM. 2012. Mixed effect Poisson log-linear models for clinical and epidemiological sleep hypnogram data. Stat Med. 31:855–870.

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