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Reiss PT, Huang L, Mennes M. 2010. Fast function-on-scalar regression with penalized basis expansions. International Journal of Biostatistics. 6:article–28.

Vogelstein JT, Conroy JC, Podrazik LJ, Kratzer SG, Fishkind DE, Vogelstein JT, Priebe CE. 2011. Fast Inexact Graph Mathing with Applications in Statistical Connectomics. under review.

Staicu AM, Crainiceanu C, Carroll RJ. 2010. Fast methods for spatially correlated multilevel functional data. Biostatistics. 11:177–194.

Clement L, De Beuf K, Thas O, Vuylsteke M, Irizarry R, Crainiceanu C. 2012. Fast wavelet based functional models for transcriptome analysis with tiling arrays. Stat Appl Genet Mol Biol. 11:1–36.

Stamatakis K, Sanders M, Caffo B, Resnick H, Gottlieb D, Mehra R, Punjabi N. 2008. Fasting Glycemia in Sleep Disordered Breathing: Lowering the Threshold on Oxyhemoglobin Desaturation. Sleep, PMCID: PMC2491502. 31:1018–1024.

Jones G, Haran M, Caffo B, Neath R. 2006. Fixed-width output analysis for Markov chain Monte Carlo. Journal of the American Statistical Association. 101:1537–1547.

Caffo B, An M, Rohde C. 2007. Flexible random intercept models for binary outcomes using mixtures of normals. Computational Statistics and Data Analysis, PMCID: PMC2031853. 51:5220–5235.

Suskauer S, Simmonds D, Caffo B, Denckla M, Pekar J, Mostofsky S. 2008. fMRI of Intrasubject Variability in ADHD: Anomalous Premotor Activity With Prefrontal Compensation. Journal of American Academy of Child & Adolescent Psychiatry, NIHMSID: 71813. 47:1141–1150.

Wager TD, Atlas LY, Lindquist MA, Roy M, Woo C-W, Kross E. 2013. An fMRI-based neurologic signature of physical pain.. N Engl J Med. 368(15):1388-97.

Lindquist MA. 2012. Functional Causal Mediation Analysis With an Application to Brain Connectivity.. J Am Stat Assoc. 107(500):1297-1309.

Lindquist MA. 2012. Functional causal mediation analysis with an application to brain connectivity. Journal of the American Statistical Association, to appear..

McLean M, Hooker G, Staicu AM, Scheipl F, Ruppert D. 2012. Functional Generalized Additive Models. J. of Computational and Graphical Statistics. :toappear.

Zipunnikov V, Caffo B, Yousem D, Davatziko C, Schwartz B, Crainiceanu C. 2011. Functional principal components model for high-dimensional brain imaging. Neuroimage, NIHSMID: 316403. 58:772–784.

Goldsmith J, Wand MP, Crainiceanu C. 2011. Functional Regression Via Variational Bayes. Electronic Journal of Statistics. 5:572–602.

Crainiceanu C, Staicu AM, Di CZ. 2009. Generalized Multilevel Functional Regression. J Am Stat Assoc. 104:1550–1561.

James B, Caffo B, Stewart W, Yousem D, Davatzikos C, Schwartz B. 2012. Genetic risk factors for longitudinal changes in structural MRI in former organolead workers. Accepted in the Journal of Aging Research.

Vogelstein JT, Gray WR, Vogelstein JT, Priebe CE. 2011. Graph Classification using Signal Subgraphs: Applications in Statistical Connectomics. under review.

Lindquist MA, Sobel ME. 2011. Graphical models, potential outcomes and causal inference: Comment on Ramsey, Spirtes and Glymour. NeuroImage. 57:334-336.

Lindquist MA, Sobel ME. 2011. Graphical models, potential outcomes and causal inference: comment on Ramsey, Spirtes and Glymour.. Neuroimage. 57(2):334-6.

Eloyan A, Shou H, Shinohara RT, Sweeney EM, Nebel MBeth, Cuzzocreo JL, Calabresi PA, Reich DS, Lindquist MA, Crainiceanu CM. 2014. Health effects of lesion localization in multiple sclerosis: spatial registration and confounding adjustment.. PLoS One. 9(9):e107263.

Woodard DB, Crainiceanu C, Ruppert D. 2013. Hierarchical Adaptive Regression Kernels for Regression with Functional Predictors.. J Comput Graph Stat. 22(4)

Degras D, Lindquist MA. 2014. A hierarchical model for simultaneous detection and estimation in multi-subject fMRI studies.. Neuroimage. 98:61-72.

Staicu AM. 2009. Higher order approximations for interval estimation in binomial settings. J. of Statistical Planning and Inference. 139:3393–3404.

Yuste R, MacLean J, Vogelstein JT, Paninski L. 2011. Imaging action potentials with calcium indicators.. Cold Spring Harbor protocols. 2009:pdb.prot5316.

Warner CV, Syc SB, Stankiewicz AM, Hiremath G, Farrell S, Crainiceanu C, Conger A, Frohman TC, Bisker ER, Balcer L et al.. 2011. The impact of utilizing different optical coherence tomography devices for clinical purposes and in multiple sclerosis trials. PLoS ONE. 6:e22947.

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